CDS

Accession Number TCMCG066C09170
gbkey CDS
Protein Id XP_034580473.1
Location complement(45865985..45866512)
Gene LOC117843849
GeneID 117843849
Organism Setaria viridis

Protein

Length 175aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034724582.1
Definition DNA-directed RNA polymerase V subunit 7-like isoform X2 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category K
Description SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397
KEGG_TC -
KEGG_Module M00180        [VIEW IN KEGG]
KEGG_Reaction R00435        [VIEW IN KEGG]
R00441        [VIEW IN KEGG]
R00442        [VIEW IN KEGG]
R00443        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE br01611        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K03015        [VIEW IN KEGG]
ko:K16253        [VIEW IN KEGG]
EC -
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03020        [VIEW IN KEGG]
ko05016        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03020        [VIEW IN KEGG]
map05016        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
GOs GO:0000418        [VIEW IN EMBL-EBI]
GO:0000419        [VIEW IN EMBL-EBI]
GO:0000428        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003697        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003727        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTTTTTCTTGAGGTAGAGATGTCATGGAATGTGTTGATATCCCCTAGCCAGCTGGACCGCAAGGGCCTCCTGCTCCGCAAGGCTATCATTGTGCGTCTTCTGGAGGATGTTACCAACAAGAGGGCTTCCAAGGAGCATGGCTACTACGTTGCCGTCAATCAGCTGAAGGCAATATCTGAAGGGAAAGTGCGTGAGCTTACTGGAGACGTTCTGTTCCCAGTCACATTCACCTGCATCACACAGAAGCCTCTGAAGGGTGAGATCTTGGTTGGATATGTGGATAGGATCCTCAAGCACGGCGTGTTTCTCAAATCTGGACCTGTTGAGAGCATCTTCATGGCTGAGAAGTCGATGAGCGATTACAAGTACATTGGAGGGGAGAACCCTATGTTCATGAACGACCACTCAAAGCTGGAGAAGGACACCGCCTTGCGTTTCAAGGTCATGGGATTCCGCTGGATGGAAGCTGACCGCCAGTTTCAGCTCCTTGCTACGATGGCTGGTGACTTCCTTGGGCCACTGTGA
Protein:  
MVFLEVEMSWNVLISPSQLDRKGLLLRKAIIVRLLEDVTNKRASKEHGYYVAVNQLKAISEGKVRELTGDVLFPVTFTCITQKPLKGEILVGYVDRILKHGVFLKSGPVESIFMAEKSMSDYKYIGGENPMFMNDHSKLEKDTALRFKVMGFRWMEADRQFQLLATMAGDFLGPL